Tensorframe
TensorFrame
¶
Bases: RecursivePrintable
A structure which allows one to manipulate tensors in a tabular manner.
The interface of this structure is inspired by the DataFrame
class
of the pandas
library.
Motivation.
It is a common scenario to have to work with arrays/tensors that are
associated with each other (e.g. when working on a knapsack problem, we
could have arrays A
and B
, where A[i]
represents the value of the
i-th item and B[i]
represents the weight of the i-th item).
A practical approach for such cases is to organize those arrays and
operate on them in a tabular manner. pandas
is a popular library
for doing such tabular operations.
In the context of evolutionary computation, efficiency via vectorization and/or parallelization becomes an important concern. For example, if we have a fitness function in which a solution vector is evaluated with the help of tabular operations, we would like to be able to obtain a batched version of that function, so that not just a solution, but an entire population can be evaluated efficiently. Another example is when developing custom evolutionary algorithms, where solutions, fitnesses, and algorithm-specific (or problem-specific) metadata can be organized in a tabular manner, and operating on such tabular data has to be vectorized and/or parallelized for increased efficiency.
TensorFrame
is introduced to address these concerns. In more details,
with evolutionary computation in mind, it has these features/behaviors:
(i) The columns of a TensorFrame
are expressed via PyTorch tensors
(or via evotorch.tools.ReadOnlyTensor
instances), allowing one
to place the tabular data on devices such as cuda.
(ii) A TensorFrame
can be placed into a function that is transformed
via torch.vmap
or evotorch.decorators.expects_ndim
or
evotorch.decorators.rowwise
, therefore it can work on batched data.
(iii) Upon being pickled or cloned, a TensorFrame
applies the clone
method on all its columns and ensures that the cloned tensors have
minimally sized storages (even when their originals might have shared
their storages with larger tensors). Therefore, one can send a
TensorFrame
to a remote worker (e.g. using ray
library), without
having to worry about oversized shared tensor storages.
(iv) A TensorFrame
can be placed as an item into an
evotorch.tools.ObjectArray
container. Therefore, it can serve as a
value in a solution of a problem whose dtype
is object
.
Basic usage. A tensorframe can be instantiated like this:
from evotorch.tools import TensorFrame
import torch
my_tensorframe = TensorFrame(
{
"COLUMN1": torch.FloatTensor([1, 2, 3, 4]),
"COLUMN2": torch.FloatTensor([10, 20, 30, 40]),
"COLUMN3": torch.FloatTensor([-10, -20, -30, -40]),
}
)
which represents the following tabular data:
float32 float32 <- dtype of the column
cpu cpu <- device of the column
COLUMN1 COLUMN2 COLUMN3
========= ========= =========
1.0 10.0 -10.0
2.0 20.0 -20.0
3.0 30.0 -30.0
4.0 40.0 -40.0
Rows can be picked and re-organized like this:
which causes my_tensorframe
to now store:
float32 float32 float32
cpu cpu cpu
COLUMN1 COLUMN2 COLUMN3
========= ========= =========
1.0 10.0 -10.0
4.0 40.0 -40.0
3.0 30.0 -30.0
A tensor of a column can be received like this:
print(my_tensorframe["COLUMN1"])
# Note: alternatively: print(my_tensorframe.COLUMN1)
# Prints: torch.tensor([1.0, 4.0, 3.0], dtype=torch.float32)
Multiple columns can be received like this:
print(my_tensorframe[["COLUMN1", "COLUMN2"]])
# Prints:
#
# float32 float32
# cpu cpu
#
# COLUMN1 COLUMN2
# ========= =========
# 1.0 10.0
# 4.0 40.0
# 3.0 30.0
The values of a column can be changed like this:
which causes my_tensorframe
to become:
float32 float32 float32
cpu cpu cpu
COLUMN1 COLUMN2 COLUMN3
========= ========= =========
1.0 10.0 -10.0
7.0 40.0 -40.0
9.0 30.0 -30.0
Multiple columns can be changed like this:
my_tensorframe.pick[1:, ["COLUMN1", "COLUMN2"]] = TensorFrame(
{
"COLUMN1": torch.FloatTensor([11.0, 12.0]),
"COLUMN2": torch.FloatTensor([44.0, 55.0]),
}
)
# Note: alternatively, the right-hand side can be given as a dictionary:
# my_tensorframe.pick[1:, ["COLUMN1", "COLUMN2"]] = {
# "COLUMN1": torch.FloatTensor([11.0, 12.0]),
# "COLUMN2": torch.FloatTensor([44.0, 55.0]),
# }
which causes my_tensorframe
to become:
float32 float32 float32
cpu cpu cpu
COLUMN1 COLUMN2 COLUMN3
========= ========= =========
1.0 10.0 -10.0
11.0 44.0 -40.0
12.0 55.0 -30.0
Further notes.
- A tensor under a TensorFrame column can have more than one dimension. Across different columns, the size of the leftmost dimensions must match.
- Unlike a
pandas.DataFrame
, a TensorFrame does not have a special index column.
Source code in evotorch/tools/tensorframe.py
53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 638 639 640 641 642 643 644 645 646 647 648 649 650 651 652 653 654 655 656 657 658 659 660 661 662 663 664 665 666 667 668 669 670 671 672 673 674 675 676 677 678 679 680 681 682 683 684 685 686 687 688 689 690 691 692 693 694 695 696 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 714 715 716 717 718 719 720 721 722 723 724 725 726 727 728 729 730 731 732 733 734 735 736 737 738 739 740 741 742 743 744 745 746 747 748 749 750 751 752 753 754 755 756 757 758 759 760 761 762 763 764 765 766 767 768 769 770 771 772 773 774 775 776 777 778 779 780 781 782 783 784 785 786 787 788 789 790 791 792 793 794 795 796 797 798 799 800 801 802 803 804 805 806 807 808 809 810 811 812 813 814 815 816 817 818 819 820 821 822 823 824 825 826 827 828 829 830 831 832 833 834 835 836 837 838 839 840 841 842 843 844 845 846 847 848 849 850 851 852 853 854 855 856 857 858 859 860 861 862 863 864 865 866 867 868 869 870 871 872 873 874 875 876 877 878 879 880 881 882 883 884 885 886 887 888 889 890 891 892 893 894 895 896 897 898 899 900 901 902 903 904 905 906 907 908 909 910 911 912 913 914 915 916 917 918 919 920 921 922 923 924 925 926 927 928 929 930 931 932 933 934 935 936 937 938 939 940 941 942 943 944 945 946 947 948 949 950 951 952 953 954 955 956 957 958 959 960 961 962 963 964 965 966 967 968 969 970 971 972 973 974 975 976 977 978 979 980 981 982 983 984 985 986 987 988 989 990 991 992 993 994 995 996 997 998 999 1000 1001 1002 1003 1004 1005 1006 1007 1008 1009 1010 1011 1012 1013 1014 1015 1016 1017 1018 1019 1020 1021 1022 1023 1024 1025 1026 1027 1028 1029 1030 1031 1032 1033 1034 1035 1036 1037 1038 1039 1040 1041 1042 1043 1044 1045 1046 1047 1048 1049 1050 1051 1052 1053 1054 1055 1056 1057 1058 1059 1060 1061 1062 1063 1064 1065 1066 1067 1068 1069 1070 1071 1072 1073 1074 1075 1076 1077 1078 1079 1080 1081 1082 1083 1084 1085 1086 1087 1088 1089 1090 1091 1092 1093 1094 1095 1096 1097 1098 1099 1100 1101 1102 1103 1104 1105 1106 1107 1108 1109 1110 1111 1112 1113 1114 1115 1116 1117 1118 1119 1120 1121 1122 1123 1124 1125 1126 1127 1128 1129 1130 1131 1132 1133 1134 1135 1136 1137 1138 1139 1140 1141 1142 1143 1144 1145 1146 1147 1148 1149 1150 1151 1152 1153 1154 1155 1156 1157 1158 1159 1160 1161 1162 1163 1164 1165 1166 1167 |
|
columns
property
¶
Columns as a list of strings
device
property
¶
Get the device(s) of this TensorFrame.
If different columns exist on different devices, a set of devices will be returned. If all the columns exist on the same device, then that device will be returned.
is_read_only
property
¶
True if this TensorFrame is read-only; False otherwise.
pick
property
¶
__init__(data=None, *, read_only=False, device=None)
¶
__init__(...)
: Initialize the TensorFrame
Parameters:
Name | Type | Description | Default |
---|---|---|---|
data
|
Optional[Union[Mapping, TensorFrame, _PandasDataFrame]]
|
Optionally a TensorFrame, or a dictionary (where the keys
are column names and the values are column values), or a
|
None
|
read_only
|
bool
|
Whether or not the newly made TensorFrame will be read-only. A read-only TensorFrame's columns will be ReadOnlyTensors, and its columns and values will not change. |
False
|
device
|
Optional[Union[device, str]]
|
If left as None, each column can be on a different device.
If given as a string or a |
None
|
Source code in evotorch/tools/tensorframe.py
argsort(by, *, indices=None, ranks=None, descending=False, join=False)
¶
Return row indices (also optionally ranks) for sorting the TensorFrame.
For example, let us assume that we have a TensorFrame named table
.
We can sort this table
like this:
indices_for_sorting = table.argsort(by="A") # sort by the column A
sorted_table = table.pick[indices_for_sorting]
Parameters:
Name | Type | Description | Default |
---|---|---|---|
by
|
Union[str, str_]
|
The name of the column according to which the TensorFrame will be sorted. |
required |
indices
|
Optional[Union[str, str_]]
|
If given as a string |
None
|
ranks
|
Optional[Union[str, str_]]
|
If given as a string |
None
|
descending
|
bool
|
If True, the sorting will be in descending order. |
False
|
join
|
bool
|
Can be used only if column names are given via |
False
|
Source code in evotorch/tools/tensorframe.py
as_tensor(x, *, to_work_with=None, broadcast_if_scalar=False)
¶
Convert the given object x
to a PyTorch tensor.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
x
|
Any
|
The object to be converted to a PyTorch tensor. |
required |
to_work_with
|
Optional[Union[str, str_, Tensor]]
|
Optionally a string, referring to an existing column
within this TensorFrame, or a PyTorch tensor. The object |
None
|
broadcast_if_scalar
|
bool
|
If this argument is given as True and if |
False
|
Source code in evotorch/tools/tensorframe.py
clone(*, preserve_read_only=False, memo=None)
¶
Get a clone of this TensorFrame.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
preserve_read_only
|
bool
|
If True, the newly made clone will be read-only only if this TensorFrame is also read-only. |
False
|
Source code in evotorch/tools/tensorframe.py
cpu()
¶
cuda()
¶
drop(*, columns)
¶
Get a new TensorFrame where the given columns are dropped.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
columns
|
Union[str, str_, Sequence]
|
A single column name or a sequence of column names to be dropped. |
required |
Source code in evotorch/tools/tensorframe.py
each(fn, *, chunk_size=None, randomness='error', join=False, override=False)
¶
For each row of this TensorFrame, perform the operations of fn
.
fn
is executed on the rows in a vectorized manner, with the help
of torch.vmap
.
The function fn
is expected to have this interface:
def fn(row: dict) -> dict:
# `row` is a dictionary where the keys are column names.
# This function is expected to return another dictionary.
...
For example, if we have a TensorFrame with columns A and B, and if we want to create a new column C where, for each row, the value under C is the sum of A's value and B's value, then the function would look like this:
Now, if our current TensorFrame looks like this:
Running tensorframe.each(do_summation_for_each_row)
will result in
the following new TensorFrame:
Parameters:
Name | Type | Description | Default |
---|---|---|---|
fn
|
Callable
|
A function which receives a dictionary as its argument, and returns another dictionary. |
required |
chunk_size
|
Optional[int]
|
For performing |
None
|
randomness
|
str
|
If given as "error" (which is the default), any random
number generation operation within |
'error'
|
join
|
bool
|
If given as True, the resulting TensorFrame will also contain this TensorFrame's columns. |
False
|
override
|
bool
|
If given as True (and if |
False
|
Source code in evotorch/tools/tensorframe.py
953 954 955 956 957 958 959 960 961 962 963 964 965 966 967 968 969 970 971 972 973 974 975 976 977 978 979 980 981 982 983 984 985 986 987 988 989 990 991 992 993 994 995 996 997 998 999 1000 1001 1002 1003 1004 1005 1006 1007 1008 1009 1010 1011 1012 1013 1014 1015 1016 1017 1018 1019 1020 1021 1022 1023 1024 1025 1026 1027 1028 1029 1030 1031 1032 1033 1034 1035 1036 1037 1038 1039 |
|
get_read_only_view()
¶
hstack(other, *, override=False)
¶
Horizontally join this TensorFrame with another.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
other
|
TensorFrame
|
The other TensorFrame. |
required |
override
|
bool
|
If this is given as True and if the other TensorFrame has overlapping columns, the other TensorFrame's values will override (i.e. will take priority) in the joined result. |
False
|
Source code in evotorch/tools/tensorframe.py
join(t)
¶
Like the hstack
method, but with a more pandas-like interface.
Joins this TensorFrame with the other TensorFrame.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
t
|
Union[TensorFrame, Sequence]
|
The TensorFrame that will be horizontally stacked to the right. |
required |
Source code in evotorch/tools/tensorframe.py
nlargest(n, columns)
¶
Sort this TensorFrame and take the largest n
rows.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
n
|
int
|
Number of rows of the resulting TensorFrame. |
required |
columns
|
Union[str, str_, Sequence]
|
The name of the column according to which the rows will be sorted. Although the name of this argument is plural ("columns") for compatibility with pandas' interface, only one column name is supported. |
required |
Source code in evotorch/tools/tensorframe.py
nsmallest(n, columns)
¶
Sort this TensorFrame and take the smallest n
rows.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
n
|
int
|
Number of rows of the resulting TensorFrame. |
required |
columns
|
Union[str, str_, Sequence]
|
The name of the column according to which the rows will be sorted. Although the name of this argument is plural ("columns") for compatibility with pandas' interface, only one column name is supported. |
required |
Source code in evotorch/tools/tensorframe.py
sort(by, *, descending=False)
¶
Return a sorted copy of this TensorFrame.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
by
|
Union[str, str_]
|
Name of the column according to which the sorting will be done. |
required |
descending
|
bool
|
If True, the sorting will be in descending order. |
False
|
Source code in evotorch/tools/tensorframe.py
sort_values(by, *, ascending=True)
¶
Like the sort
method, but with a more pandas-like interface.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
by
|
Union[str, str_, Sequence]
|
Column according to which this TensorFrame will be sorted. |
required |
ascending
|
Union[bool, Sequence]
|
If True, the sorting will be in ascending order. |
True
|
Source code in evotorch/tools/tensorframe.py
to_string(*, max_depth=DEFAULT_MAX_DEPTH_FOR_PRINTING)
¶
Return the string representation of this TensorFrame
Source code in evotorch/tools/tensorframe.py
vstack(other)
¶
Vertically join this TensorFrame with the other TensorFrame.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
other
|
TensorFrame
|
The other TensorFrame which will be at the bottom. |
required |
Source code in evotorch/tools/tensorframe.py
with_columns(**kwargs)
¶
Get a modified copy of this TensorFrame with some columns added/updated.
The columns to be updated or added are expected as keyword arguments.
For example, if a keyword argument is given as A=new_a_values
, then,
if A
already exists in the original TensorFrame, those values will be
dropped and the resulting TensorFrame will have the new values
(new_a_values
). On the other hand, if A
does not exist in the
original TensorFrame, the resulting TensorFrame will have a new column
A
with the given new_a_values
.
Source code in evotorch/tools/tensorframe.py
with_enforced_device(device)
¶
Make a shallow copy of this TensorFrame with an enforced device.
In the newly made shallow copy, columns will be forcefully moved onto the specified device.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
device
|
Union[str, device]
|
The device to which the new TensorFrame's columns will move. |
required |
Source code in evotorch/tools/tensorframe.py
without_enforced_device()
¶
Make a shallow copy of this TensorFrame without any enforced device.
In the newly made shallow copy, columns will be able to exist on different devices.
Returns:
Type | Description |
---|---|
TensorFrame
|
A shallow copy of this TensorFrame without any enforced device. |